MEDomicsLab-docs
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  • 👋Welcome!
  • 👊Quick start
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    • 🔵Design
      • Extraction Module
        • Image Extraction Page
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        • MEDimage
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        • Overview
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        • Crash tutorial
    • 🟢Deployment
      • Application Module
    • 🛠️Miscellaneous
  • 📄Testing Phase with MIMIC
    • MIMIC data access
    • Step 1: Install and Explore
    • Step 2: Extract Data
    • Step 3: Prepare ML tables
    • Step 4: Explore Data
    • Step 5: Vacations
    • Step 6: Create Model
    • Step 7: Evaluate & Apply Model
    • Step 8: Challenge
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Overview

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Dataset used in the video (breast_cancer.csv) :

  • Set a workspace

  • Overview of the main components

  • Icon sidebar overview

  • Import a dataset

  • Copy and Paste a dataset

  • Reveal the dataset in the file explorer -

  • Create a new folder

  • Rename the folder

  • Rename the folder again

  • Move the dataset in the renamed folder

  • Change the workspace

  • Delete an unwanted copy of the dataset

  • Resize and collapse the sidebar

1. Set your workspace

The application needs a workspace to run.

At first, we recommend you create an empty folder (named "Workspace" for example) and choose it as your workspace directory.

The DATA folder is where you will store your datasets

The EXPERIMENTS folder is where the experiments, the models and the results will be stored

The folders DATA and EXPERIMENTS cannot be deleted inside the application, we strongly recommend you to avoid erasing them from outside of the application

The .medomics folder is used by application to store all the infos of the workspace, don't touch it if you want the app to run smoothly

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https://www.kaggle.com/datasets/uciml/breast-cancer-wisconsin-data
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The folder structure of a workspace
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